BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013H09LP1|AL426606
(811 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1522 1588 0.0
>3x_Contig1522
Length = 7810
Score = 1588 bits (800), Expect = 0.0
Identities = 804/806 (99%)
Strand = Plus / Plus
Query: 6 taaaatggatttcaaatgttcctcggcgtataatttcaatttattttcatccttggccct 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 taaaatggatttcaaatgttcctcggcgtataatttcaatttattttcatccttggccct 332
Query: 66 cttttcgtttttaacgtataaggacaacggtctaatcatggaattgaccaagaaaacttt 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 cttttcgtttttaacgtataaggacaacggtctaatcatggaattgaccaagaaaacttt 392
Query: 126 ggcactgccttcattcttggtgattgccttgctcaattttttgaaatctttccattcaat 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 ggcactgccttcattcttggtgattgccttgctcaattttttgaaatctttccattcaat 452
Query: 186 ggcttgaatttcatttttgtgttctggtttaaactcaaagtcttcaggtacacctttcac 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 ggcttgaatttcatttttgtgttctggtttaaactcaaagtcttcaggtacacctttcac 512
Query: 246 gagaaagattttaaagtttttaccattcatgttccgttcaacgtattgatcagcatcaat 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 gagaaagattttaaagtttttaccattcatgttccgttcaacgtattgatcagcatcaat 572
Query: 306 gaatccggttaaatcgaagccggtctcctctttaacttcccttatgcagcatgcgacgtc 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 gaatccggttaaatcgaagccggtctcctctttaacttcccttatgcagcatgcgacgtc 632
Query: 366 atcttcatctttaccaattttacctcgtgggaaagaccagtgttttgaattgatacctct 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 atcttcatctttaccaattttacctcgtgggaaagaccagtgttttgaattgatacctct 692
Query: 426 caacaataatatctttgacaaactatcgttgaatatagcggctcccctaacgggaatggt 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 caacaataatatctttgacaaactatcgttgaatatagcggctcccctaacgggaatggt 752
Query: 486 cttcttataatttgaaaacttgacaagtgcattttctggtgtgatatcccagttccaaat 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 cttcttataatttgaaaacttgacaagtgcattttctggtgtgatatcccagttccaaat 812
Query: 546 caaaggacagatgtctatgacgatcttggagaagcttttaatgcttaaattgggcaaata 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 caaaggacagatgtctatgacgatcttggagaagcttttaatgcttaaattgggcaaata 872
Query: 606 tgggttcattagtttaacgaaatcagtgtaaaaccatgaggcttcttcaaaatggaatag 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 873 tgggttcattagtttaacgaaatcagtgtaaaaccatgaggcttcttcaaaatggaatag 932
Query: 666 aacccgctcaactgttgataaatcttccgggggaacattgagaatgaatctgacaacaag 725
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 933 aacccgctcaactgttgataaatcttccgggggaacattgagaatgaatctgacaacaaa 992
Query: 726 gtcttcgactgcattctccaaagaaacagtctcaaacggacgtdacaacggtaatgacat 785
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 993 gtcttcgactgcattctccaaagaaacagtctcaaacggacgtaacaacggtaatgacat 1052
Query: 786 atttcagtctaatttaaatggttaat 811
||||||||||||||||||||||||||
Sbjct: 1053 atttcagtctaatttaaatggttaat 1078
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7693
Number of Sequences: 1807
Number of extensions: 7693
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 811
length of database: 10,358,551
effective HSP length: 16
effective length of query: 795
effective length of database: 10,329,639
effective search space: 8212063005
effective search space used: 8212063005
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)